42 lines
1.6 KiB
Makefile
42 lines
1.6 KiB
Makefile
PORTNAME= pyteomics
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PORTVERSION= 5.0.1
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CATEGORIES= science python
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MASTER_SITES= PYPI
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PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX}
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MAINTAINER= sunpoet@FreeBSD.org
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COMMENT= Python modules for proteomics data analysis
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WWW= https://pyteomics.readthedocs.io/en/latest/ \
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https://github.com/levitsky/pyteomics
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LICENSE= APACHE20
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BUILD_DEPENDS= ${PYTHON_PKGNAMEPREFIX}setuptools>=0:devel/py-setuptools@${PY_FLAVOR} \
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${PYTHON_PKGNAMEPREFIX}wheel>=0:devel/py-wheel@${PY_FLAVOR}
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USES= python
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USE_PYTHON= autoplist concurrent pep517
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NO_ARCH= yes
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OPTIONS_DEFINE= DF GRAPHICS PROFORMA TDA UNIMOD XML
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OPTIONS_DEFAULT=DF GRAPHICS PROFORMA TDA UNIMOD XML
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DF_DESC= DataFrame support
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GRAPHICS_DESC= Graphics support
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PROFORMA_DESC= Proteoform and Peptidoform Notation support
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TDA_DESC= Target-decoy approach support
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UNIMOD_DESC= Unimod database support
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XML_DESC= XML support
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DF_RUN_DEPENDS= ${PYTHON_PKGNAMEPREFIX}pandas>=0.17,1:math/py-pandas@${PY_FLAVOR}
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GRAPHICS_RUN_DEPENDS= ${PYTHON_PKGNAMEPREFIX}matplotlib>=0:math/py-matplotlib@${PY_FLAVOR}
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TDA_RUN_DEPENDS= ${PYTHON_PKGNAMEPREFIX}numpy>=0,1:math/py-numpy@${PY_FLAVOR}
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UNIMOD_RUN_DEPENDS= ${PYTHON_PKGNAMEPREFIX}lxml>=0:devel/py-lxml@${PY_FLAVOR} \
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${PYTHON_PKGNAMEPREFIX}sqlalchemy20>=1.4:databases/py-sqlalchemy20@${PY_FLAVOR}
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XML_RUN_DEPENDS= ${PYTHON_PKGNAMEPREFIX}lxml>=0:devel/py-lxml@${PY_FLAVOR} \
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${PYTHON_PKGNAMEPREFIX}numpy>=0,1:math/py-numpy@${PY_FLAVOR} \
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${PYTHON_PKGNAMEPREFIX}psims>=0:science/py-psims@${PY_FLAVOR}
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PROFORMA_RUN_DEPENDS= ${PYTHON_PKGNAMEPREFIX}psims>=0.1.42:science/py-psims@${PY_FLAVOR}
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.include <bsd.port.mk>
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