44 lines
2.0 KiB
Makefile
44 lines
2.0 KiB
Makefile
PORTNAME= toil
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DISTVERSION= 9.5.0
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CATEGORIES= misc python
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MASTER_SITES= PYPI
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PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX}
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MAINTAINER= yuri@FreeBSD.org
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COMMENT= Pipeline management software for clusters
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WWW= https://github.com/DataBiosphere/toil
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LICENSE= APACHE20
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RUN_DEPENDS= ${PYTHON_PKGNAMEPREFIX}addict>=2.2.1:devel/py-addict@${PY_FLAVOR} \
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${PYTHON_PKGNAMEPREFIX}coloredlogs>=15:devel/py-coloredlogs@${PY_FLAVOR} \
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${PYTHON_PKGNAMEPREFIX}configargparse>=1.7:devel/py-configargparse@${PY_FLAVOR} \
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${PYTHON_PKGNAMEPREFIX}dill>=0.3.2:devel/py-dill@${PY_FLAVOR} \
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${PYTHON_PKGNAMEPREFIX}docker>=6.1.0:sysutils/py-docker@${PY_FLAVOR} \
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${PYTHON_PKGNAMEPREFIX}enlighten>=1.5.2:devel/py-enlighten@${PY_FLAVOR} \
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${PYTHON_PKGNAMEPREFIX}prompt-toolkit>=3.0:devel/py-prompt-toolkit@${PY_FLAVOR} \
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${PYTHON_PKGNAMEPREFIX}psutil>=6.1.0:sysutils/py-psutil@${PY_FLAVOR} \
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${PYTHON_PKGNAMEPREFIX}PyPubSub>=4.0.3:devel/py-PyPubSub@${PY_FLAVOR} \
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${PYTHON_PKGNAMEPREFIX}python-dateutil>0:devel/py-python-dateutil@${PY_FLAVOR} \
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${PYTHON_PKGNAMEPREFIX}pyyaml>=6:devel/py-pyyaml@${PY_FLAVOR} \
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${PYTHON_PKGNAMEPREFIX}requests>0:www/py-requests@${PY_FLAVOR} \
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${PYTHON_PKGNAMEPREFIX}ruamel.yaml>=0.15:devel/py-ruamel.yaml@${PY_FLAVOR} \
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${PYTHON_PKGNAMEPREFIX}typing-extensions>=4.6.2:devel/py-typing-extensions@${PY_FLAVOR} \
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${PYTHON_PKGNAMEPREFIX}urllib3>=1.26.0:net/py-urllib3@${PY_FLAVOR}
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#RUN_DEPENDS+= ${PYTHON_PKGNAMEPREFIX}mypy-boto3-s3>=1.28.3:devel/py-mypy-boto3-s3@${PY_FLAVOR} \
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# ${PYTHON_PKGNAMEPREFIX}boto3-stubs>=1.28.3:www/py-boto3-stubs@${PY_FLAVOR} \
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# ${PYTHON_PKGNAMEPREFIX}moto>=5.0.3:devel/py-moto@${PY_FLAVOR}
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TEST_DEPENDS= ${PYTHON_PKGNAMEPREFIX}pytest-cov>0:devel/py-pytest-cov@${PY_FLAVOR} \
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${PYTHON_PKGNAMEPREFIX}boto3>0:www/py-boto3@${PY_FLAVOR} \
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${PYTHON_PKGNAMEPREFIX}libcloud>=0.14.0:net/py-libcloud@${PY_FLAVOR}
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USES= python shebangfix
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USE_PYTHON= distutils concurrent autoplist pytest
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SHEBANG_FILES= src/toil/test/cwl/mock_mpi/fake_mpi_run.py \
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src/toil/test/docs/scripts/example_cachingbenchmark.py
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NO_ARCH= yes
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.include <bsd.port.mk>
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