52 lines
1.5 KiB
Makefile
52 lines
1.5 KiB
Makefile
PORTNAME= seqan3
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DISTVERSION= 3.4.2
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CATEGORIES= biology devel math
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MASTER_SITES= https://github.com/cpm-cmake/CPM.cmake/releases/download/v0.42.1/:cpm
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DISTFILES= CPM.cmake:cpm
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DIST_SUBDIR= ${PORTNAME}-${DISTVERSION}
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EXTRACT_ONLY= ${DISTNAME}${EXTRACT_SUFX} \
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xxsds-sdsl-lite-d54d389_GH0${EXTRACT_SUFX}
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MAINTAINER= yuri@FreeBSD.org
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COMMENT= C++ header-only library for biological sequence analysis
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WWW= https://www.seqan.de/ \
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https://github.com/seqan/seqan3
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LICENSE= BSD3CLAUSE
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LICENSE_FILE= ${WRKSRC}/LICENSE.md
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HPP_DEPENDS= cereal>0:devel/cereal \
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range-v3>0:devel/range-v3
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BUILD_DEPENDS= ${HPP_DEPENDS}
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RUN_DEPENDS= ${HPP_DEPENDS} \
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coin-or-lemon>0:math/lemon
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USES= cmake compiler:c++23-lang localbase
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USE_GITHUB= yes
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GH_ACCOUNT= seqan
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GH_TUPLE= xxsds:sdsl-lite:d54d389:sdsl_lite/submodules/sdsl-lite
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CMAKE_ARGS= -DCPM_LOCATION=${DISTDIR}/${DIST_SUBDIR}
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TEST_WRKSRC= ${WRKSRC}/.test
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NO_ARCH= yes
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xpost-patch:
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# remove CPM.cmake: it triggers undesirable logic in cmake scripts
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@${RM} ${WRKSRC}/cmake/CPM.cmake
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post-install:
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@${RM} -r ${STAGEDIR}${DOCSDIR}
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do-test:
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@${MKDIR} ${TEST_WRKSRC} && cd ${TEST_WRKSRC} && \
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${SETENV} ${CONFIGURE_ENV} ${CMAKE_BIN} ${CMAKE_ARGS} -DFETCHCONTENT_FULLY_DISCONNECTED=OFF ${WRKSRC}/test/unit && \
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${SETENV} ${MAKE_ENV} ${MAKE_CMD} ${MAKE_ARGS} ${ALL_TARGET} && \
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ctest
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# tests as of 3.4.2: 96% tests passed, 14 tests failed out of 315: some tests fail wuth SIGILL, see https://github.com/seqan/seqan3/issues/3415, other tests also fail, see https://github.com/seqan/seqan3/issues/3416
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.include <bsd.port.mk>
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