35 lines
966 B
Makefile
35 lines
966 B
Makefile
PORTNAME= gmap
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PORTVERSION= 2025.07.31
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CATEGORIES= biology
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MASTER_SITES= http://research-pub.gene.com/gmap/src/
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DISTNAME= ${PORTNAME}-gsnap-${PORTVERSION:C|\.|-|g}
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MAINTAINER= jwb@FreeBSD.org
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COMMENT= Genomic Mapping and Alignment Program for mRNA and EST Sequences
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WWW= https://github.com/genentech/gmap-gsnap \
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http://research-pub.gene.com/gmap/
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LICENSE= GMAP
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LICENSE_NAME= GMAP License
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LICENSE_FILE= ${WRKSRC}/COPYING
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LICENSE_PERMS= dist-mirror pkg-mirror auto-accept
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# FIXME: Source shows support for other platforms, but build fails on
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# aarch64 trying to use asm(bsr)
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ONLY_FOR_ARCHS= amd64 i386 powerpc64le
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ONLY_FOR_ARCHS_REASON= Upstream supports only x86 and possibly POWER8
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USES= gmake perl5
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GNU_CONFIGURE= yes
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CONFLICTS_INSTALL= cpuid scotch # bin/cpuid bin/gmap
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WRKSRC= ${WRKDIR}/${PORTNAME}-${PORTVERSION:C|\.|-|g}
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CFLAGS+= -fcommon
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OPTIONS_DEFINE= SIMD
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SIMD_CONFIGURE_OFF= --disable-builtin-popcount --disable-simd
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.include <bsd.port.mk>
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